Publications

Caballero-Huertas, M; Ladisa, C; Lopez-Chillaron, S; Joly, S; Habibi, HR; Ribas, L. 2025. Identifying sex-linked metabolomic biomarkers in fish gonads after bacterial infection. METABOLOMICS. 21.

Caballero-Huertas, M; Salazar-Moscoso, M; Ribas, L. 2025. Sex is a Crucial Factor in the Immune Response: An Ichthyological Perspective. Reviews in Fisheries Science & Aquaculture 33(2): 217-237.

Caizergues, AE. 2025. Does Urbanization Alter Purifying Selection? A Case Study in the Burrowing Owl. Integrative and Comparative Biology: icaf065.

Camagny, T; Ivorra, S; Terral, J-F; Garberi, P; Carré, A; Paolini-Saez, H; Perrin, T; Bouby, L; Delhon, C. 2025. Macchia or forest? Toward the reconstruction of Ericaceae formations in Corsica NW Mediterranean during the Holocene using a quantitative wood anatomy analysis. Journal of Archaeological Science: Reports 62: 105014.

Cano, AV; Jensen, OP; Dakos, V. 2025. Identifying fish populations prone to abrupt shifts via dynamical footprint analysis. Proceedings of the National Academy of Sciences USA 122(34): e2505461122.

Cassar, L-F; Nabholz, B; Reboud, EL; Chevalier, E; Lafon, BJ; Cotton, AM; Condamine, FL. 2025. Whole-genome data shed light on speciation and within-species differentiation of the Papilio machaon complex around the Mediterranean Basin. Systematic Entomology: on-line. 50. p692-712.

Catrain, M; Combourieu-Nebout, N; Lebreton, V; Fauquette, S; Peyron, O; Fries, M; Richard, P; Dubost, L; Joannin, S; Suc, J-P; Paquier Comas, E; Lepelletier, J; Moncel, M-H. 2025. Vegetation and Climate dynamics in the South-western Mediterranean during MIS 37–31 (~1.25 - ~1. 06 Ma): Insights from the marine core ODP Site 976. Quaternary Science Reviews 369: 109635.

Čerňanský, A; Georgalis, GL; Tabuce, R; Vidalenc, D. 2025. The first snake from the lower Eocene (MP 10-11) of the Cos locality, Phosphorites du Quercy, France. Comptes Rendus. Palevol 24(5): 61-66.

Cernansky, A; Tabuce, R; Vidalenc, D. 2025. The first evidence of iguanians and scincoids from the lower Eocene of the Cos locality (Phosphorites du Quercy, France). Journal of Paleontology 99(2): 430-440.

Chan, Y-B; Scornavacca, C; Charleston, M. 2025. A probabilistic algorithm for gene-species reconciliation with segmental duplications. Journal of Computational Biology: on-line.

Charrasse, S; Poquillon, T; Saint-Omer, C; Schunemann, A; Weill, M; Racine, V; Aouacheria, A. 2025. Computational histology reveals that concomitant application of insect repellent with sunscreen impairs UV protection in an ex vivo human skin model. Parasites & Vectors 18(1): 84.

Charton, L; Combourieu-Nebout, N; Bertini, A; Lebreton, V; Peyron, O; Robles, M; Sassoon, D; Moncel, M-H. 2025. Vegetation and climate changes during the Middle to Upper Palaeolithic transition in the southwestern Mediterranean: What happened to the last Neanderthals during Heinrich stadial 4?. Quaternary Science Reviews 359: 109345.

Chary, K; Jaeger, C; Jansen, HM; Harchaoui, S; Aubin, J. 2025. Evaluating nutrient circularity in integrated aquaculture systems: criteria and indicators. Journal of Cleaner Production 504: 145414.

Chary, K; Soulé, E; Harchaoui, S. 2025. Circularity as a complement to productivity, efficiency, and self-sufficiency concepts for greater sustainability in food systems. Environmental Research: Food Systems 2: 043001.

Chevalier, M; Gosling, WD; Hooghiemstra, H; Cartapanis, O; Chase, BM; Kaboth-Bahr, S. 2025. Eccentricity-driven glacial climate variability and its influence on speciation in the tropical Andes. Quaternary Science Advances 18: 100278.

Clist, B; Doucet, JL; Giresse, P; Maley, J. 2025. The Sangha River Interval, Its Earliest Village Settlements, and the Bantu-Speakers' Expansion During the Late Holocene (Cameroon, Central African Republic, Congo Republic). AFRICAN ARCHAEOLOGICAL REVIEW. 42. p173-209.

Colin, T; Dakos, V; Barron, AB; Meikle, WG; Altmann, EG; Latty, T. 2025. Temperature as an early warning signal of honeybee colony failure. Ecological Informatics 92: 103445.

Combe, M; Deremarque, T; Givens, J; Gozlan, RE. 2025. Unveiling the Genomic Landscape of Pseudorasbora parva, the Most Invasive Freshwater Fish Worldwide: A Key Step Towards Understanding Invasion Dynamics. Fishes 10(6): 297.

Cornuault, J; Pardi, F; Scornavacca, C. 2025. Link between the Birth-Death process and the Kingman Coalescent — Applications to Phylogenetic Epidemiology. Systematic Biology: syaf024.

Courville, E; Métais, G; Antoine, P-O; Marivaux, L; Jouve, S. 2025. Giant longirostrine crocodylians from the Lower Miocene of Pakistan: new material and taxonomic review. Papers in Palaeontology 11(3): e70010.

Cromartie, A; De Jonge, C; Ménot, G; Robles, M; Dugerdil, L; Peyron, O; Rodrigo-Gámiz, M; Camuera, J; Ramos-Roman, MJ; Jiménez-Moreno, G; Colombié, C; Sahakyan, L; Joannin, S. 2025. Utilizing Probability Estimates from Machine Learning and Pollen to Understand the Depositional Influences on Branched GDGT in Wetlands, Peatlands, and Lakes. Biogeosciences 22: 7687-7708.

Crônier, C; Denayer, J; Feist, R; Mottequin, B. 2025. The latest Devonian Famennian phacopid trilobite Omegops from Belgium. Geologica Belgica 28(1-2): on-line.

Cruz, MA; Godoy, O; Fragata, I; Sousa, VC; Magalhães, S; Zélé, F. 2025. Competition for food affects the strength of reproductive interference and its consequences for species coexistence. Functional Ecology 39(8): 1982-1997.

Csapó, HK; Weslawski, JM; Mieszkowska, N; Dahl-Hansen, I; Gantsevich, M; Grabowski, M; Bierne, N. 2025. Genome sequence analysis provides evidence that a boreal crustacean colonised Svalbard well before the ongoing Atlantification of the Arctic. Heredity 134: 558-566.

d'Oliveira, L; Joannin, S; Ménot, G; Combourieu-Nebout, N; Dugerdil, L; Blache, M; Robles, M; Florenzano, A; Masi, A; Mercuri, AM; Sadori, L; Balasse, M; Peyron, O. 2025. Holocene climate dynamics in the central Mediterranean inferred from pollen data. Climate of the Past 21: 2331-2359.

d'Oliveira, L; Joannin, S; Ménot, G; Combourieu-Nebout, N; Dugerdil, L; Blache, M; Robles, M; Florenzano, A; Masi, A; Mercuri, AM; Sadori, L; Balasse, M; Peyron, O. 2025. Palaeoclimate synthesis of the central Mediterranean area from pollen data. Climate of the Past: 1-46.

Danet, A; Kéfi, S; Johnson, TF; Beckerman, AP. 2025. Response diversity is a major driver of temporal stability in complex food webs. Proceedings of the Royal Society B - Biological Sciences 292(2058): 20250730.

Danneyrolles, V; Chavardès, RD; Girardin, MP; Ali, AA; Arseneault, D; Asselin, H; Bélisle, A-C; Boucher, Y; Cyr, D; Drobyshev, I; Erni, S; Gaboriau, DM; Gauthier, S; Gennaretti, F; Johnson, EA; Larsen, CPS; Leduc, A; Parisien, M-A; Portier, J; Shakeri, Z; Wallenius, TH; Bergeron, Y. 2025. Contextualizing recent increases in Canadian boreal wildfire activity: decadal burn rates still within historical variability of the two past centuries. Canadian Journal of Forest Research 55: 1-12.

Daraghmeh, N; Exter, K; Pagnier, J; Balazy, P; Cancio, I; Chatzigeorgiou, G; Chatzinikolaou, E; Chelchowski, M; Chrismas, NAM; Comtet, T; Dailianis, T; Deneudt, K; de Cerio, OD; Digenis, M; Gerovasileiou, V; González, J; Kauppi, L; Kristoffersen, JB; Kuklinski, P; Lasota, R; Levy, L; Malachowicz, M; Mavric, B; Mortelmans, J; Paredes, E; Pocwierz-Kotus, A; Reiss, H; Santi, I; Sarafidou, G; Skouradakis, G; Solbakken, J; Staehr, PAU; Tajadura, J; Thyrring, J; Troncoso, JS; Vernadou, E; Viard, F; Zafeiropoulos, H; Zbawicka, M; Pavloudi, C; Obst, M. 2025. A Long-Term Ecological Research Data Set From the Marine Genetic Monitoring Program ARMS-MBON 2018-2020. MOLECULAR ECOLOGY RESOURCES. 25.

Dejeux, L; Saclier, N; Tariel-Adam, J; Hoareau, M; Lefébure, T; Konecny, L; Plénet, S; Luquet, E. 2025. Transcriptomic basis of within- and trans-generational predator-induced plasticity in the freshwater snail Physa acuta. Heredity 134(7): 439-449.