Publications

Paradis, E. 2013. Molecular dating of phylogenies by likelihood methods: a comparison of models and a new information criterion. Molecular Phylogenetics and Evolution 67 (2): 436-444..

Paradis, E; Tedesco, PA; Hugueny, B. 2013. QUANTIFYING VARIATION IN SPECIATION AND EXTINCTION RATES WITH CLADE DATA. EVOLUTION. 67. p3617-3627.

Pariaud, B; van den Berg, F; van den Bosch, F; Powers, SJ; Kaltz, O; Lannou, C. 2013. Shared influence of pathogen and host genetics on a trade-off between latent period and spore production capacity in the wheat pathogen, Puccinia triticina. EVOLUTIONARY APPLICATIONS. 6. p303-312.

Pariselle, A; Bitja Nyom, AR; Bilong, CF. 2013. Checklist of the Ancyrocephalidae (Monogenea) parasitizing Tilapia species in Cameroon, with the description of three new species. Zootaxa 3599(1): 078-086..

Pavey, SA; Sevellec, M; Adam, W; Normandeau, E; Lamaze, FC; Gagnaire, PA; Filteau, M; Hebert, FO; Maaroufi, H; Bernatchez, L. 2013. Nonparallelism in MHCII diversity accompanies nonparallelism in pathogen infection of lake whitefish (Coregonus clupeaformis) species pairs as revealed by next-generation sequencing. MOLECULAR ECOLOGY. 22. p3833-3849.

Pellegrin-Boucher, E; Le Roy, F; Gurau, C. 2013. Coopetitive strategies in the ICT sector: typology and stability. TECHNOLOGY ANALYSIS & STRATEGIC MANAGEMENT. 25. p71-89.

Phung, TN; Caruso, D; Godreuil, S; Keck, N; Vallaeys, T; Avarre, JC. 2013. Rapid Detection and Identification of Nontuberculous Mycobacterial Pathogens in Fish by Using High-Resolution Melting Analysis. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 79. p7837-7845.

Pinton, A; Agnèse, JF; Paugy, D; Otero, O. 2013. A large-scale phylogeny of Synodontis (Mochokidae, Siluriformes) reveals the influence of geological events on continental diversity during the Cenozoic. MOLECULAR PHYLOGENETICS AND EVOLUTION. 66. p1027-1040.

Planchon, O; Thothong, W; Herbreteau, V; Morand, S; Valentin, C. 2013. Environmental changes in Northern Thailand: possible links to rodent-borne diseases. Southeast Asian Journal of Tropical Medicine and Public Health..

Plouviez, S; Faure, B; Le Guen, D; Lallier, FH; Bierne, N; Jollivet, D. 2013. A New Barrier to Dispersal Trapped Old Genetic Clines That Escaped the Easter Microplate Tension Zone of the Pacific Vent Mussels. PLOS ONE. 8.

Pocquet, N; Milesi, P; Makoundou, P; Unal, S; Zumbo, B; Atyame, CM; Darriet, F; Dehecq, J-S; Thiria, J; Bheecarry, A; Iyaloo, DP; Weill, M; Chandre, F; Labbé, P. 2013. Multiple Insecticide Resistances in the Disease Vector Culex p. Quinquefasciatus from Western Indian Ocean. PLOS ONE. 8.

Poisot, T; Mouquet, N; Gravel, D. 2013. Trophic complementarity drives the biodiversity-ecosystem functioning relationship in food webs. ECOLOGY LETTERS. 16. p853-861.

Poisot, T; Stanko, M; Miklisova, D; Morand, S. 2013. Facultative and obligate parasite communities exhibit different network properties. PARASITOLOGY. 140. p1340-1345.

Prado, LF; Wainer, I; Chiessi, CM; Ledru, M-P; Turcq, B. 2013. A mid-Holocene climate reconstruction for eastern South America. CLIMATE OF THE PAST. 9. p2117-2133.

Pujos, F; Salas-Gismondi, B, G.; Baby, P; Goillot, C; Tejada, J; Antoine, P-O. 2013. Implication of the presence of Megathericulus (Xenarthra: Tardigrada: Megatheriidae) in the Laventan of Peruvian Amazonia. JOURNAL OF SYSTEMATIC PALAEONTOLOGY. 11. p973-991.

Quérouil, S; Kiszka, J; Cordeiro, AR; Cascão, I; Freitas, L; Dinis, A; Alves, F; Serrão Santos, R; Bandarra, N. 2013. Investigating stock structure and trophic relationships among island-associated dolphins in the oceanic waters of the North Atlantic using fatty acid and stable isotope analyses. Marine Biology 160(6): 1325-1337..

Raeymaekers, JAM; Hablutzel, PI; Gregoir, AF; Bamps, J; Roose, AK; Vanhove, MPM; Van Steenberge, M; Pariselle, A; Huyse, T; Snoeks, J; Volckaert, FAM. 2013. Contrasting parasite communities among allopatric colour morphs of the Lake Tanganyika cichlid Tropheus. BMC EVOLUTIONARY BIOLOGY. 13.

Ramsayer, J; Kaltz, O; Hochberg, ME. 2013. Evolutionary rescue in populations of Pseudomonas fluorescens across an antibiotic gradient. EVOLUTIONARY APPLICATIONS. 6. p608-616.

Ranwez, V; Holtz, Y; Sarah, G; Ardisson, M; Santoni, S; Glémin, S; Tavaud-Pirra, M; David, J. 2013. Disentangling homeologous contigs in allo-tetraploid assembly: application to durum wheat. BMC BIOINFORMATICS. 14.

Renaud, S; Auffray, JC. 2013. The direction of main phenotypic variance as a channel to morphological evolution: case studies in murine rodents. HYSTRIX-ITALIAN JOURNAL OF MAMMALOGY. 24. p85-93.

Rey, O; Estoup, A; Facon, B; Loiseau, A; Aebi, A; Duron, O; Vavre, F; Foucaud, J. 2013. Distribution of Endosymbiotic Reproductive Manipulators Reflects Invasion Process and Not Reproductive System Polymorphism in the Little Fire Ant Wasmannia auropunctata. PLOS ONE. 8.

Riquet, F; Daguin-Thiébaut, C; Ballenghien, M; Bierne, N; Viard, F. 2013. Contrasting patterns of genome-wide polymorphism in the native and invasive range of the marine mollusc Crepidula fornicata. MOLECULAR ECOLOGY. 22. p1003-1018.

Rohfritsch, A; Bierne, N; Boudry, P; Heurtebise, S; Cornette, F; Lapegue, S. 2013. Population genomics shed light on the demographic and adaptive histories of European invasion in the Pacific oyster, Crassostrea gigas. EVOLUTIONARY APPLICATIONS. 6. p1064-1078.

Römer, U; Beninde, J; Duponchelle, F; Garcia Davila, CR; Vela Diaz, A; Renno, J-F. 2013. Description of Apistogramma paulmuelleri sp. n., a new geophagine cichlid species (Teleostei: Perciformes) from the Amazon river basin in Loreto, Peru. Vertebrate Zoology 63(1): 15-34..

Romiguier, J; Ranwez, V; Delsuc, F; Galtier, N; Douzery, EJP. 2013. Less Is More in Mammalian Phylogenomics: AT-Rich Genes Minimize Tree Conflicts and Unravel the Root of Placental Mammals. MOLECULAR BIOLOGY AND EVOLUTION. 30. p2134-2144.

Romiguier, J; Ranwez, V; Douzery, EJP; Galtier, N. 2013. Genomic Evidence for Large, Long-Lived Ancestors to Placental Mammals. MOLECULAR BIOLOGY AND EVOLUTION. 30. p5-13.

Ronfort, J; Glemin, S. 2013. MATING SYSTEM, HALDANE'S SIEVE, AND THE DOMESTICATION PROCESS. EVOLUTION. 67. p1518-1526.

Rousset, F. 2013. Exegeses on Maximum Genetic Differentiation. GENETICS. 194. p557-559.

Roux, C; Tsagkogeorga, G; Bierne, N; Galtier, N. 2013. Crossing the Species Barrier: Genomic Hotspots of Introgression between Two Highly Divergent Ciona intestinalis Species. MOLECULAR BIOLOGY AND EVOLUTION. 30. p1574-1587.

Rubinstein, ND; Feldstein, T; Shenkar, N; Botero-Castro, F; Griggio, F; Mastrototaro, F; Delsuc, F; Douzery, EJP; Gissi, C; Huchon, D. 2013. Deep Sequencing of Mixed Total DNA without Barcodes Allows Efficient Assembly of Highly Plastic Ascidian Mitochondrial Genomes. GENOME BIOLOGY AND EVOLUTION. 5. p1185-1199.